# Source code for openquake.hazardlib.correlation

```
# The Hazard Library
# Copyright (C) 2012-2018 GEM Foundation
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Affero General Public License as
# published by the Free Software Foundation, either version 3 of the
# License, or (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU Affero General Public License for more details.
#
# You should have received a copy of the GNU Affero General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
"""
Module :mod:`openquake.hazardlib.correlation` defines correlation models for
spatially-distributed ground-shaking intensities.
"""
import abc
import numpy
[docs]class BaseCorrelationModel(metaclass=abc.ABCMeta):
"""
Base class for correlation models for spatially-distributed ground-shaking
intensities.
"""
[docs] def apply_correlation(self, sites, imt, residuals, stddev_intra=0):
"""
Apply correlation to randomly sampled residuals.
:param sites:
:class:`~openquake.hazardlib.site.SiteCollection` residuals were
sampled for.
:param imt:
Intensity measure type object, see :mod:`openquake.hazardlib.imt`.
:param residuals:
2d numpy array of sampled residuals, where first dimension
represents sites (the length as ``sites`` parameter) and
second one represents different realizations (samples).
:param stddev_intra:
Intra-event standard deviation array. Note that different sites do
not necessarily have the same intra-event standard deviation.
:returns:
Array of the same structure and semantics as ``residuals``
but with correlations applied.
NB: the correlation matrix is cached. It is computed only once
per IMT for the complete site collection and then the portion
corresponding to the sites is multiplied by the residuals.
"""
# intra-event residual for a single relization is a product
# of lower-triangle decomposed correlation matrix and vector
# of N random numbers (where N is equal to number of sites).
# we need to do that multiplication once per realization
# with the same matrix and different vectors.
try:
corma = self.cache[imt]
except KeyError:
corma = self.get_lower_triangle_correlation_matrix(
sites.complete, imt)
self.cache[imt] = corma
if len(sites.complete) == len(sites):
return numpy.dot(corma, residuals)
# it is important to allocate little memory, this is why I am
# accumulating below; if S is the length of the complete sites
# the correlation matrix has shape (S, S) and the residuals (N, s),
# where s is the number of samples
return numpy.sum(corma[sites.sids, sid] * res
for sid, res in zip(sites.sids, residuals))
[docs]class JB2009CorrelationModel(BaseCorrelationModel):
"""
"Correlation model for spatially distributed ground-motion intensities"
by Nirmal Jayaram and Jack W. Baker. Published in Earthquake Engineering
and Structural Dynamics 2009; 38, pages 1687-1708.
:param vs30_clustering:
Boolean value to indicate whether "Case 1" or "Case 2" from page 1700
should be applied. ``True`` value means that Vs 30 values show or are
expected to show clustering ("Case 2"), ``False`` means otherwise.
"""
def __init__(self, vs30_clustering):
self.vs30_clustering = vs30_clustering
self.cache = {} # imt -> correlation model
def _get_correlation_matrix(self, sites, imt):
return jbcorrelation(sites, imt, self.vs30_clustering)
[docs] def get_lower_triangle_correlation_matrix(self, sites, imt):
"""
Get lower-triangle matrix as a result of Cholesky-decomposition
of correlation matrix.
The resulting matrix should have zeros on values above
the main diagonal.
The actual implementations of :class:`BaseCorrelationModel` interface
might calculate the matrix considering site collection and IMT (like
:class:`JB2009CorrelationModel` does) or might have it pre-constructed
for a specific site collection and IMT, in which case they will need
to make sure that parameters to this function match parameters that
were used to pre-calculate decomposed correlation matrix.
:param sites:
:class:`~openquake.hazardlib.site.SiteCollection` to create
correlation matrix for.
:param imt:
Intensity measure type object, see :mod:`openquake.hazardlib.imt`.
"""
return numpy.linalg.cholesky(self._get_correlation_matrix(sites, imt))
[docs]def jbcorrelation(sites_or_distances, imt, vs30_clustering=False):
"""
Returns the Jayaram-Baker correlation model.
:param sites_or_distances:
SiteCollection instance o ristance matrix
:param imt:
Intensity Measure Type (PGA or SA)
:param vs30_clustering:
flag, defalt false
"""
if hasattr(sites_or_distances, 'mesh'):
distances = sites_or_distances.mesh.get_distance_matrix()
else:
distances = sites_or_distances
# formulae are from page 1700
if imt.period < 1:
if not vs30_clustering:
# case 1, eq. (17)
b = 8.5 + 17.2 * imt.period
else:
# case 2, eq. (18)
b = 40.7 - 15.0 * imt.period
else:
# both cases, eq. (19)
b = 22.0 + 3.7 * imt.period
# eq. (20)
return numpy.exp((- 3.0 / b) * distances)
[docs]class HM2018CorrelationModel(BaseCorrelationModel):
"""
"Uncertainty in intraevent spatial correlation of elastic pseudo-
acceleration spectral ordinates"
by Pablo Heresi and Eduardo Miranda. Submitted for possible publication
in Bulletin of Earthquake Engineering, 2018.
:param uncertainty_multiplier:
Value to be multiplied by the uncertainty in the correlation parameter
beta. If uncertainty_multiplier = 0 (default), the median value is
used as a constant value.
"""
def __init__(self, uncertainty_multiplier=0):
self.uncertainty_multiplier = uncertainty_multiplier
self.distance_matrix = {}
self.cache = {}
def _get_correlation_matrix(self, sites, imt):
return hmcorrelation(sites, imt, self.uncertainty_multiplier)
[docs] def apply_correlation(self, sites, imt, residuals, stddev_intra):
"""
Apply correlation to randomly sampled residuals.
See Parent function
"""
# stddev_intra is repeated if it is only 1 value for all the residuals
if stddev_intra.shape[0] == 1:
stddev_intra = numpy.matlib.repmat(
stddev_intra, len(sites.complete), 1)
# Reshape 'stddev_intra' if needed
stddev_intra = stddev_intra.squeeze()
if not stddev_intra.shape:
stddev_intra = stddev_intra[None]
if self.uncertainty_multiplier == 0: # No uncertainty
# residuals were sampled from a normal distribution with
# stddev_intra standard deviation. 'residuals_norm' are residuals
# normalized, sampled from a standard normal distribution.
# For this, every row of 'residuals' (every site) is divided by its
# corresponding standard deviation element.
residuals_norm = residuals / stddev_intra[sites.sids, None]
# Lower diagonal of the Cholesky decomposition from/to cache
try:
cormaLow = self.cache[imt]
except KeyError:
# Note that instead of computing the whole correlation matrix
# corresponding to sites.complete, here we compute only the
# correlation matrix corresponding to sites.
cormaLow = numpy.linalg.cholesky(
numpy.diag(stddev_intra[sites.sids]) *
self._get_correlation_matrix(sites, imt) *
numpy.diag(stddev_intra[sites.sids]))
self.cache[imt] = cormaLow
# Apply correlation
return numpy.dot(cormaLow, residuals_norm)
else: # Variability (uncertainty) is included
nsim = len(residuals[1])
nsites = len(residuals)
# Re-sample all the residuals
residuals_correlated = residuals * 0
for isim in range(0, nsim):
corma = self._get_correlation_matrix(sites, imt)
cov = (numpy.diag(stddev_intra[sites.sids]) * corma *
numpy.diag(stddev_intra[sites.sids]))
residuals_correlated[0:, isim] = (
numpy.random.multivariate_normal(
numpy.zeros(nsites), cov, 1))
return residuals_correlated
[docs]def hmcorrelation(sites_or_distances, imt, uncertainty_multiplier=0):
"""
Returns the Heresi-Miranda correlation model.
:param sites_or_distances:
SiteCollection instance o distance matrix
:param imt:
Intensity Measure Type (PGA or SA)
:param uncertainty_multiplier:
Value to be multiplied by the uncertainty in the correlation parameter
beta. If uncertainty_multiplier = 0 (default), the median value is
used as a constant value.
"""
if hasattr(sites_or_distances, 'mesh'):
distances = sites_or_distances.mesh.get_distance_matrix()
else:
distances = sites_or_distances
period = imt.period
# Eq. (9)
if period < 1.37:
Med_b = 4.231 * period * period - 5.180 * period + 13.392
else:
Med_b = 0.140 * period * period - 2.249 * period + 17.050
# Eq. (10)
Std_b = (4.63e-3 * period*period + 0.028 * period + 0.713)
# Obtain realization of b
if uncertainty_multiplier == 0:
beta = Med_b
else:
beta = numpy.random.lognormal(
numpy.log(Med_b), Std_b * uncertainty_multiplier)
# Eq. (8)
return numpy.exp(-numpy.power((distances / beta), 0.55))
```